Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945086.1_cds_XP_016487722.1_78425
CDS Infomation

[gene=LOC107807801] [db_xref=GeneID:107807801] [protein=la-related protein 1C-like] [protein_id=XP_016487722.1] [location=join(47642..48175,48744..49326,49411..49555,49656..49746,53930..54001,54970..55263)] [gbkey=CDS]
Sequence

ATGGCTGCACCGGCTCCAACTCCGGCTCATCATTCTCACCGGAATACTATCTCGGACACC
GGAAGCAGCATTGACGCCGGTGGTCTCAACAGCCCCCAGTCTCGGCGATCATCAGCCGCT
GCGCGTGGCGTTTCCTCGGCTTGGACGCAGATTGTTCGGAGTAGCGACTCAGAATCGACA
GTTGTGGCGATTTCCTCTTCACCTCCTCTTCCTCCTCCACTTTCTCCTCCGGCGTATTCT
GAGCAAACCGTTCATTCCTCTGATTGTTCGCCTTCTGATGACGTGGCGACAGCCGGTAGT
GCTGCTACAGAAGCTCAGCTTGAGAGCTCTGATAACGGAAACAGCGATGACAGCAACAGC
AATGTGTCTAAAAAGCCCGCTTGGAACAAACCGTCAAATGGTGCAGCTGAGGTTAGTCCA
GTCATGGGTGCTGTCTGCTGGCCTGCTCTCTCCGATTCCACTAAGGCTTCACCAAAATCG
TCTTCTTCCGAGTCTCTCAAAGCTCTCTCCGACGGATCAGTTTCTGTAACACAGGGAACG
GGAATGGCATCATCTTCTCATGGGCAAGCTAATACGAACAATGCGAACCCTAATTCAACG
TTGAACCATGTTGCTCCCACCCGCCAAAGGTCTATGAAGCGCGGTGGTGGTTATTCAAAC
CATAATGCATCAGCCAATGGTGGCTTCTCTCAGCAACAGGGGCAGAGTTCTGAGGCGGAA
ATAGTTTTTAATAAATCTGGGAAGTCCGGTAATTCTGGTGCTGATTCATCTTCAAAGGAT
AATAGTCATAGGGATGGTGGACAATGGGGAGGATTTGGATCTCAATCACATGGTGGACAT
GAGCACCAACATCAACGAAATTCAAACAGGAGAGGCAATGTTGGTCCACACCCCCGTGGA
GATGGTACGTATCATCTAGGTTATGGGGGTAGGCGTGATCAGGAACGTGGAAATCAGGAT
TGGAAACCCCACAGAGGTTGGGGAAATAGGGATGCACACATGCAGCCGCAGAGAGTTCCA
GCGAGGCCATTTATGGGAGGCCCACCTCATACTTCCCCACCTTTTATACCTCCAACCATG
CCTGTGCATCCCTATCGAGCTCCCATGGTTTACTCTGAGGTACCGCCTGTATATTTTTTT
CCAGGTCCACTCCCTGATACATTCAGAATGCCTATGCTTTCTCCTGTGCCACCTGTCTTC
TTTCATATGCCAGATCCCCAGTTGCAAACCAAAATAGTGAACCAGATTGATTATTATTTC
AGTAATGAAAATTTAATTAAGGATACATTCTTGCGGCGGAACATGGATGAACATGGATGG
GTTTCTGTTATGCTAATAGCAGGTTTCAAAAAAGTAATGTCGCTGACAGATAATATACAA
CTGATACTGGATGTTATGAGGTCCTCTACTGTTGTAGAAGTGCAGGGCGAAAAGTTAAGG
CGTAGAAATGACTGGAATCATTGGATCATACCACCATCAGTTCAGAATTCAACCATAAGT
CCTCAATCTCCACAAAAATCTAGTCCTGATTCTCTTGCAGAAAATCTCCAGCGTGTTGCA
TTTGATGACGAGACTATAAGACATGGAAATGCCGAAGCATATCTTAGTAGACCATCATCT
GCTGAATTAAGTACTCCATCTAAGCAGTTTGGCAATGAGATGGCTGGAAAAGCTGGTGCT
CAGCGTGGACAGCCAATGCCAGTTGGAAATCCAATTTAA

Peptide Sequence

PEP ID

XP_016487722.1
PEP Infomation

PREDICTED: la-related protein 1C-like [Nicotiana tabacum]
Sequence

MAAPAPTPAHHSHRNTISDTGSSIDAGGLNSPQSRRSSAAARGVSSAWTQIVRSSDSEST
VVAISSSPPLPPPLSPPAYSEQTVHSSDCSPSDDVATAGSAATEAQLESSDNGNSDDSNS
NVSKKPAWNKPSNGAAEVSPVMGAVCWPALSDSTKASPKSSSSESLKALSDGSVSVTQGT
GMASSSHGQANTNNANPNSTLNHVAPTRQRSMKRGGGYSNHNASANGGFSQQQGQSSEAE
IVFNKSGKSGNSGADSSSKDNSHRDGGQWGGFGSQSHGGHEHQHQRNSNRRGNVGPHPRG
DGTYHLGYGGRRDQERGNQDWKPHRGWGNRDAHMQPQRVPARPFMGGPPHTSPPFIPPTM
PVHPYRAPMVYSEVPPVYFFPGPLPDTFRMPMLSPVPPVFFHMPDPQLQTKIVNQIDYYF
SNENLIKDTFLRRNMDEHGWVSVMLIAGFKKVMSLTDNIQLILDVMRSSTVVEVQGEKLR
RRNDWNHWIIPPSVQNSTISPQSPQKSSPDSLAENLQRVAFDDETIRHGNAEAYLSRPSS
AELSTPSKQFGNEMAGKAGAQRGQPMPVGNPI

Transcript Sequence

Gene sequence data has not been registered.